Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.73□□□□□ -0.69
Sigmar1O55242 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Gm26833-201ENSMUST00000180899 440 ntBASIC10.73□□□□□ -0.69
Sigmar1O55242 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Gm43173-201ENSMUST00000202246 593 ntBASIC10.73□□□□□ -0.69
Sigmar1O55242 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.73□□□□□ -0.69
Sigmar1O55242 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sigmar1O55242 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sigmar1O55242 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Rps24-207ENSMUST00000224568 714 ntBASIC10.72□□□□□ -0.69
Sigmar1O55242 AC093043.1-201ENSMUST00000226700 898 ntBASIC10.72□□□□□ -0.69
Sigmar1O55242 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.72□□□□□ -0.69
Sigmar1O55242 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.72□□□□□ -0.69
Sigmar1O55242 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sigmar1O55242 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Sigmar1O55242 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.71□□□□□ -0.69
Sigmar1O55242 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.71□□□□□ -0.69
Sigmar1O55242 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.71□□□□□ -0.69
Sigmar1O55242 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.71□□□□□ -0.69
Sigmar1O55242 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sigmar1O55242 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms