Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rpl35aO55142 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rpl35aO55142 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rpl35aO55142 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rpl35aO55142 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm25990-201ENSMUST00000102440 86 ntBASIC11.52□□□□□ -0.57
Rpl35aO55142 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm2651-201ENSMUST00000203560 838 ntBASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.52□□□□□ -0.57
Rpl35aO55142 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.52□□□□□ -0.57
Rpl35aO55142 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.52□□□□□ -0.57
Rpl35aO55142 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rpl35aO55142 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.52□□□□□ -0.57
Rpl35aO55142 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Rpl35aO55142 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.51□□□□□ -0.57
Rpl35aO55142 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rpl35aO55142 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rpl35aO55142 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.5□□□□□ -0.57
Rpl35aO55142 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.5□□□□□ -0.57
Rpl35aO55142 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rpl35aO55142 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rpl35aO55142 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms