Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf13O54965 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf13O54965 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf13O54965 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rnf13O54965 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.03□□□□□ -0.16
Rnf13O54965 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf13O54965 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf13O54965 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf13O54965 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.03□□□□□ -0.16
Rnf13O54965 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf13O54965 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf13O54965 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf13O54965 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf13O54965 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf13O54965 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf13O54965 Mir6982-201ENSMUST00000184354 68 ntBASIC14.02□□□□□ -0.17
Rnf13O54965 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf13O54965 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf13O54965 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf13O54965 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf13O54965 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf13O54965 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf13O54965 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.01□□□□□ -0.17
Rnf13O54965 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Mir770-201ENSMUST00000103252 94 ntBASIC14.01□□□□□ -0.17
Rnf13O54965 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rnf13O54965 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Gm9987-201ENSMUST00000069768 567 ntBASIC14.01□□□□□ -0.17
Rnf13O54965 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf13O54965 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf13O54965 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rnf13O54965 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf13O54965 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rnf13O54965 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Gm7367-201ENSMUST00000057611 492 ntBASIC14□□□□□ -0.17
Rnf13O54965 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rnf13O54965 Gm37728-201ENSMUST00000195025 2292 ntBASIC14□□□□□ -0.17
Rnf13O54965 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14□□□□□ -0.17
Rnf13O54965 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf13O54965 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms