Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Gm25406-201ENSMUST00000157599 105 ntBASIC12.73□□□□□ -0.37
Tnfsf12O54907 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.73□□□□□ -0.37
Tnfsf12O54907 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.73□□□□□ -0.37
Tnfsf12O54907 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf12O54907 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.72□□□□□ -0.37
Tnfsf12O54907 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.72□□□□□ -0.37
Tnfsf12O54907 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.72□□□□□ -0.37
Tnfsf12O54907 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf12O54907 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Gm15165-201ENSMUST00000118140 502 ntBASIC12.71□□□□□ -0.37
Tnfsf12O54907 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Gm25745-201ENSMUST00000174945 133 ntBASIC12.71□□□□□ -0.37
Tnfsf12O54907 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Gm17807-201ENSMUST00000186869 298 ntBASIC12.71□□□□□ -0.37
Tnfsf12O54907 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.71□□□□□ -0.37
Tnfsf12O54907 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfsf12O54907 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf12O54907 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf12O54907 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tnfsf12O54907 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf12O54907 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms