Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.53■□□□□ 0.08
Phox2bO35690 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Phox2bO35690 Mir7085-201ENSMUST00000184353 66 ntBASIC15.53■□□□□ 0.08
Phox2bO35690 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.53■□□□□ 0.08
Phox2bO35690 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.53■□□□□ 0.08
Phox2bO35690 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Phox2bO35690 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Phox2bO35690 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Phox2bO35690 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Phox2bO35690 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Phox2bO35690 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.52■□□□□ 0.08
Phox2bO35690 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Phox2bO35690 Gm25406-201ENSMUST00000157599 105 ntBASIC15.52■□□□□ 0.08
Phox2bO35690 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.52■□□□□ 0.08
Phox2bO35690 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.52■□□□□ 0.08
Phox2bO35690 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.52■□□□□ 0.08
Phox2bO35690 Gm18622-201ENSMUST00000219361 595 ntBASIC15.52■□□□□ 0.08
Phox2bO35690 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.52■□□□□ 0.08
Phox2bO35690 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Phox2bO35690 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Phox2bO35690 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Phox2bO35690 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Phox2bO35690 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.52■□□□□ 0.07
Phox2bO35690 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Phox2bO35690 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Phox2bO35690 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.51■□□□□ 0.07
Phox2bO35690 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Phox2bO35690 Gm5177-201ENSMUST00000183092 997 ntBASIC15.51■□□□□ 0.07
Phox2bO35690 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.51■□□□□ 0.07
Phox2bO35690 AC132446.1-201ENSMUST00000222655 226 ntBASIC15.51■□□□□ 0.07
Phox2bO35690 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Phox2bO35690 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.51■□□□□ 0.07
Phox2bO35690 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Phox2bO35690 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.5■□□□□ 0.07
Phox2bO35690 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Phox2bO35690 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.5■□□□□ 0.07
Phox2bO35690 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.5■□□□□ 0.07
Phox2bO35690 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.5■□□□□ 0.07
Phox2bO35690 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.5■□□□□ 0.07
Phox2bO35690 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.5■□□□□ 0.07
Phox2bO35690 Gm9899-201ENSMUST00000065519 555 ntBASIC15.5■□□□□ 0.07
Phox2bO35690 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Phox2bO35690 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Phox2bO35690 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Phox2bO35690 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms