Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Capn1O35350 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.32□□□□□ -0.12
Capn1O35350 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Capn1O35350 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.32□□□□□ -0.12
Capn1O35350 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Capn1O35350 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.32□□□□□ -0.12
Capn1O35350 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Capn1O35350 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.31□□□□□ -0.12
Capn1O35350 Gm13036-201ENSMUST00000117799 748 ntBASIC14.31□□□□□ -0.12
Capn1O35350 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.31□□□□□ -0.12
Capn1O35350 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Capn1O35350 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.31□□□□□ -0.12
Capn1O35350 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.31□□□□□ -0.12
Capn1O35350 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
Capn1O35350 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.31□□□□□ -0.12
Capn1O35350 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Capn1O35350 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Sybu-209ENSMUST00000228639 4113 ntBASIC14.31□□□□□ -0.12
Capn1O35350 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.31□□□□□ -0.12
Capn1O35350 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.31□□□□□ -0.12
Capn1O35350 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Capn1O35350 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Capn1O35350 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Capn1O35350 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.3□□□□□ -0.12
Capn1O35350 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Capn1O35350 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.3□□□□□ -0.12
Capn1O35350 Gm5264-201ENSMUST00000190584 848 ntBASIC14.3□□□□□ -0.12
Capn1O35350 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.3□□□□□ -0.12
Capn1O35350 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.3□□□□□ -0.12
Capn1O35350 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Capn1O35350 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Capn1O35350 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Capn1O35350 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Capn1O35350 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Capn1O35350 Gm11594-201ENSMUST00000122313 162 ntBASIC14.29□□□□□ -0.12
Capn1O35350 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.29□□□□□ -0.12
Capn1O35350 Gm27628-201ENSMUST00000184911 107 ntBASIC14.29□□□□□ -0.12
Capn1O35350 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms