Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcof1O08784 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tcof1O08784 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tcof1O08784 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.06■□□□□ 0.48
Tcof1O08784 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.06■□□□□ 0.48
Tcof1O08784 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tcof1O08784 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.05■□□□□ 0.48
Tcof1O08784 Gm9727-201ENSMUST00000161387 555 ntBASIC18.05■□□□□ 0.48
Tcof1O08784 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.05■□□□□ 0.48
Tcof1O08784 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.05■□□□□ 0.48
Tcof1O08784 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tcof1O08784 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tcof1O08784 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tcof1O08784 Gm12260-201ENSMUST00000122447 411 ntBASIC18.04■□□□□ 0.48
Tcof1O08784 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.04■□□□□ 0.48
Tcof1O08784 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.04■□□□□ 0.48
Tcof1O08784 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tcof1O08784 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.04■□□□□ 0.48
Tcof1O08784 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.04■□□□□ 0.48
Tcof1O08784 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.04■□□□□ 0.48
Tcof1O08784 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.04■□□□□ 0.48
Tcof1O08784 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.04■□□□□ 0.48
Tcof1O08784 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tcof1O08784 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tcof1O08784 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.03■□□□□ 0.48
Tcof1O08784 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tcof1O08784 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
Tcof1O08784 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tcof1O08784 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Tcof1O08784 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.03■□□□□ 0.48
Tcof1O08784 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tcof1O08784 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tcof1O08784 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.03■□□□□ 0.48
Tcof1O08784 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tcof1O08784 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcof1O08784 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Tcof1O08784 Gm14722-201ENSMUST00000118943 689 ntBASIC18.02■□□□□ 0.48
Tcof1O08784 Gm13597-201ENSMUST00000121239 375 ntBASIC18.02■□□□□ 0.48
Tcof1O08784 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tcof1O08784 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.02■□□□□ 0.48
Tcof1O08784 Gm8318-201ENSMUST00000182954 872 ntBASIC18.02■□□□□ 0.48
Tcof1O08784 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tcof1O08784 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.02■□□□□ 0.48
Tcof1O08784 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Tcof1O08784 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tcof1O08784 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms