Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nfil3O08750 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.72■□□□□ 0.43
Nfil3O08750 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.72■□□□□ 0.43
Nfil3O08750 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.72■□□□□ 0.43
Nfil3O08750 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.72■□□□□ 0.43
Nfil3O08750 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Nfil3O08750 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nfil3O08750 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfil3O08750 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfil3O08750 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nfil3O08750 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
Nfil3O08750 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nfil3O08750 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nfil3O08750 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nfil3O08750 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nfil3O08750 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.7■□□□□ 0.42
Nfil3O08750 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Nfil3O08750 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.7■□□□□ 0.42
Nfil3O08750 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nfil3O08750 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.7■□□□□ 0.42
Nfil3O08750 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Gm8318-201ENSMUST00000182954 872 ntBASIC17.7■□□□□ 0.42
Nfil3O08750 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.7■□□□□ 0.42
Nfil3O08750 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nfil3O08750 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.7■□□□□ 0.42
Nfil3O08750 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nfil3O08750 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.7■□□□□ 0.42
Nfil3O08750 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.69■□□□□ 0.42
Nfil3O08750 Gm27300-201ENSMUST00000184085 97 ntBASIC17.69■□□□□ 0.42
Nfil3O08750 Gm27335-201ENSMUST00000184758 97 ntBASIC17.69■□□□□ 0.42
Nfil3O08750 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.69■□□□□ 0.42
Nfil3O08750 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.69■□□□□ 0.42
Nfil3O08750 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.69■□□□□ 0.42
Nfil3O08750 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.69■□□□□ 0.42
Nfil3O08750 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.69■□□□□ 0.42
Nfil3O08750 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nfil3O08750 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms