Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gm13418-201ENSMUST00000119097 944 ntBASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gm27646-201ENSMUST00000183989 110 ntBASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 BC037039-201ENSMUST00000192003 2205 ntBASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Gm6296-201ENSMUST00000222599 943 ntBASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13d-3J3QMG8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-3J3QMG8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-3J3QMG8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-3J3QMG8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13d-3J3QMG8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 Sybu-209ENSMUST00000228639 4113 ntBASIC13.58□□□□□ -0.24
Trav13d-3J3QMG8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-3J3QMG8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 181.4 ms