Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm7730-201ENSMUST00000212486 454 ntBASIC18.54■□□□□ 0.56
NpcdF8VQB8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NpcdF8VQB8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Gm16198-201ENSMUST00000118766 670 ntBASIC18.53■□□□□ 0.56
NpcdF8VQB8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.53■□□□□ 0.56
NpcdF8VQB8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.53■□□□□ 0.56
NpcdF8VQB8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NpcdF8VQB8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NpcdF8VQB8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NpcdF8VQB8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NpcdF8VQB8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NpcdF8VQB8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Gm17837-201ENSMUST00000186435 985 ntBASIC18.51■□□□□ 0.55
NpcdF8VQB8 Gm9794-201ENSMUST00000202370 423 ntBASIC18.51■□□□□ 0.55
NpcdF8VQB8 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.51■□□□□ 0.55
NpcdF8VQB8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NpcdF8VQB8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.5■□□□□ 0.55
NpcdF8VQB8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.5■□□□□ 0.55
NpcdF8VQB8 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.5■□□□□ 0.55
NpcdF8VQB8 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.5■□□□□ 0.55
NpcdF8VQB8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.5■□□□□ 0.55
NpcdF8VQB8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NpcdF8VQB8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NpcdF8VQB8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms