Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.56□□□□□ -0.08
Colca2F8VPY8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Colca2F8VPY8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.55□□□□□ -0.08
Colca2F8VPY8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.55□□□□□ -0.08
Colca2F8VPY8 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.55□□□□□ -0.08
Colca2F8VPY8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Colca2F8VPY8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Gm12859-201ENSMUST00000117834 427 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 Gm14928-201ENSMUST00000120198 477 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.54□□□□□ -0.08
Colca2F8VPY8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Colca2F8VPY8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.53□□□□□ -0.08
Colca2F8VPY8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Colca2F8VPY8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.52□□□□□ -0.08
Colca2F8VPY8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Colca2F8VPY8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.52□□□□□ -0.08
Colca2F8VPY8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Colca2F8VPY8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Colca2F8VPY8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.52□□□□□ -0.08
Colca2F8VPY8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms