Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube4aE9Q735 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Ube4aE9Q735 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.49■□□□□ 0.55
Ube4aE9Q735 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.49■□□□□ 0.55
Ube4aE9Q735 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ube4aE9Q735 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube4aE9Q735 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22065-201ENSMUST00000103753 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22066-201ENSMUST00000103761 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24932-201ENSMUST00000103763 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24115-201ENSMUST00000103799 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22190-201ENSMUST00000103827 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22191-201ENSMUST00000103831 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24721-201ENSMUST00000103849 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm28018-201ENSMUST00000103869 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm26399-201ENSMUST00000103937 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Mir449b-201ENSMUST00000104833 80 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm16026-204ENSMUST00000162652 683 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 AA543401-201ENSMUST00000164248 1269 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25948-201ENSMUST00000175334 112 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25349-201ENSMUST00000177728 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm23616-201ENSMUST00000177797 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25871-201ENSMUST00000177816 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24752-201ENSMUST00000178240 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24496-201ENSMUST00000178287 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25649-201ENSMUST00000178476 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25548-201ENSMUST00000178681 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm23147-201ENSMUST00000178841 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm26095-201ENSMUST00000179270 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22171-201ENSMUST00000179283 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm23936-201ENSMUST00000179354 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm22619-201ENSMUST00000179516 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25255-201ENSMUST00000179579 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24755-201ENSMUST00000179691 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm26506-201ENSMUST00000179692 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm25086-201ENSMUST00000179931 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm23243-201ENSMUST00000180047 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24659-201ENSMUST00000180212 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm24169-201ENSMUST00000180244 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm23689-201ENSMUST00000180354 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm27359-201ENSMUST00000184153 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm27785-201ENSMUST00000184268 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm27466-201ENSMUST00000184396 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm27703-201ENSMUST00000184836 110 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.47■□□□□ 0.55
Ube4aE9Q735 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube4aE9Q735 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms