Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf11E9PZM7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scaf11E9PZM7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Scaf11E9PZM7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Gm12091-201ENSMUST00000146791 830 ntBASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 AC238811.1-201ENSMUST00000225302 441 ntBASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scaf11E9PZM7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scaf11E9PZM7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Gm45668-201ENSMUST00000211271 493 ntBASIC21.32■■□□□ 1
Scaf11E9PZM7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Scaf11E9PZM7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.32■■□□□ 1
Scaf11E9PZM7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scaf11E9PZM7 AC160980.1-201ENSMUST00000224136 970 ntBASIC21.32■■□□□ 1
Scaf11E9PZM7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Scaf11E9PZM7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC21.31■■□□□ 1
Scaf11E9PZM7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Gm4204-201ENSMUST00000110798 1231 ntBASIC21.31■■□□□ 1
Scaf11E9PZM7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
Scaf11E9PZM7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scaf11E9PZM7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scaf11E9PZM7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Gm9115-201ENSMUST00000120192 1348 ntBASIC21.3■■□□□ 1
Scaf11E9PZM7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Scaf11E9PZM7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.3■■□□□ 1
Scaf11E9PZM7 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.3■■□□□ 1
Scaf11E9PZM7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.3■■□□□ 1
Scaf11E9PZM7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Scaf11E9PZM7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scaf11E9PZM7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Scaf11E9PZM7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.29■■□□□ 1
Scaf11E9PZM7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.29■■□□□ 1
Scaf11E9PZM7 Gm4875-201ENSMUST00000118257 786 ntBASIC21.29■■□□□ 1
Scaf11E9PZM7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC21.29■■□□□ 1
Scaf11E9PZM7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC21.29■■□□□ 1
Scaf11E9PZM7 Gm45195-201ENSMUST00000205597 1008 ntBASIC21.29■■□□□ 1
Scaf11E9PZM7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scaf11E9PZM7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm24543-201ENSMUST00000103867 82 ntBASIC21.28■■□□□ 1
Scaf11E9PZM7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC21.28■■□□□ 1
Scaf11E9PZM7 AY702102-202ENSMUST00000194651 1173 ntBASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm42612-201ENSMUST00000197986 623 ntBASIC21.28■■□□□ 1
Scaf11E9PZM7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms