Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm24169-201ENSMUST00000180244 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm23689-201ENSMUST00000180354 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm27359-201ENSMUST00000184153 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm27785-201ENSMUST00000184268 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm27466-201ENSMUST00000184396 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm27703-201ENSMUST00000184836 110 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm10253-201ENSMUST00000194270 940 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Clrn2B2RVW2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Gm27622-201ENSMUST00000183779 60 ntBASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Gm2272-201ENSMUST00000194903 582 ntBASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Gm5779-201ENSMUST00000218467 910 ntBASIC17.84■□□□□ 0.45
Clrn2B2RVW2 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn2B2RVW2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn2B2RVW2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Gm14722-201ENSMUST00000118943 689 ntBASIC17.83■□□□□ 0.44
Clrn2B2RVW2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn2B2RVW2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn2B2RVW2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms