Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm12887B1AVM1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm12887B1AVM1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.52□□□□□ -0.4
Gm12887B1AVM1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gm6257-201ENSMUST00000163864 910 ntBASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.52□□□□□ -0.41
Gm12887B1AVM1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gm10566-201ENSMUST00000086739 996 ntBASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.52□□□□□ -0.41
Gm12887B1AVM1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm12887B1AVM1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms