Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Syt7-204ENSMUST00000223586 1344 ntBASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Gm6912-201ENSMUST00000117218 544 ntBASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Gm12490-201ENSMUST00000120255 560 ntBASIC15.72■□□□□ 0.11
Col4a6B1AVK5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col4a6B1AVK5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm27838-201ENSMUST00000184829 128 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm29310-201ENSMUST00000185468 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21825-201ENSMUST00000185728 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm29109-201ENSMUST00000185895 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21896-201ENSMUST00000186520 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21873-201ENSMUST00000186728 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21794-201ENSMUST00000187056 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21880-201ENSMUST00000187275 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21826-201ENSMUST00000187451 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21198-201ENSMUST00000188393 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21749-201ENSMUST00000189343 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21901-201ENSMUST00000189568 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm29424-201ENSMUST00000189716 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm28599-201ENSMUST00000189838 694 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21867-201ENSMUST00000189917 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm29269-201ENSMUST00000190087 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21722-201ENSMUST00000190153 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm28423-201ENSMUST00000190701 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21899-201ENSMUST00000190745 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21910-201ENSMUST00000191163 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21849-201ENSMUST00000191571 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm28678-201ENSMUST00000191593 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm20910-201ENSMUST00000193268 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm21871-201ENSMUST00000194621 696 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.71■□□□□ 0.11
Col4a6B1AVK5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a6B1AVK5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a6B1AVK5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a6B1AVK5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col4a6B1AVK5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.71■□□□□ 0.1
Col4a6B1AVK5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gm5479-201ENSMUST00000160578 435 ntBASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Gm29667-201ENSMUST00000190817 490 ntBASIC15.7■□□□□ 0.1
Col4a6B1AVK5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col4a6B1AVK5 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms