Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sh2d4bA6X942 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh2d4bA6X942 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sh2d4bA6X942 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Sh2d4bA6X942 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.55■□□□□ 0.24
Sh2d4bA6X942 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Gm17271-201ENSMUST00000165535 355 ntBASIC16.54■□□□□ 0.24
Sh2d4bA6X942 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sh2d4bA6X942 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh2d4bA6X942 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Gm8396-201ENSMUST00000057361 823 ntBASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sh2d4bA6X942 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.52■□□□□ 0.24
Sh2d4bA6X942 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.52■□□□□ 0.23
Sh2d4bA6X942 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.51■□□□□ 0.23
Sh2d4bA6X942 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh2d4bA6X942 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms