Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.03□□□□□ -0.32
Col6a4A2AX52 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a4A2AX52 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Gm8969-201ENSMUST00000199694 526 ntBASIC13.02□□□□□ -0.32
Col6a4A2AX52 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.02□□□□□ -0.32
Col6a4A2AX52 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.02□□□□□ -0.32
Col6a4A2AX52 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Gm25857-201ENSMUST00000082788 129 ntBASIC13.02□□□□□ -0.32
Col6a4A2AX52 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a4A2AX52 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.02□□□□□ -0.33
Col6a4A2AX52 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a4A2AX52 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a4A2AX52 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a4A2AX52 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Gm25287-201ENSMUST00000103846 110 ntBASIC13□□□□□ -0.33
Col6a4A2AX52 Gm22918-201ENSMUST00000103855 110 ntBASIC13□□□□□ -0.33
Col6a4A2AX52 Gm12008-201ENSMUST00000117791 755 ntBASIC13□□□□□ -0.33
Col6a4A2AX52 Gm27437-201ENSMUST00000183429 107 ntBASIC13□□□□□ -0.33
Col6a4A2AX52 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Col6a4A2AX52 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13□□□□□ -0.33
Col6a4A2AX52 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a4A2AX52 Gm18057-201ENSMUST00000208220 503 ntBASIC13□□□□□ -0.33
Col6a4A2AX52 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col6a4A2AX52 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a4A2AX52 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Col6a4A2AX52 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a4A2AX52 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms