Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.41□□□□□ -0.1
IsxA1A546 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.41□□□□□ -0.1
IsxA1A546 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Gm5417-201ENSMUST00000079706 384 ntBASIC14.41□□□□□ -0.1
IsxA1A546 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
IsxA1A546 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IsxA1A546 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
IsxA1A546 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
IsxA1A546 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.4□□□□□ -0.1
IsxA1A546 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
IsxA1A546 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.4□□□□□ -0.1
IsxA1A546 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.4□□□□□ -0.1
IsxA1A546 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.4□□□□□ -0.1
IsxA1A546 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IsxA1A546 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.39□□□□□ -0.11
IsxA1A546 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
IsxA1A546 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.39□□□□□ -0.11
IsxA1A546 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
IsxA1A546 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.39□□□□□ -0.11
IsxA1A546 Gm44450-201ENSMUST00000199528 114 ntBASIC14.39□□□□□ -0.11
IsxA1A546 Timm23-208ENSMUST00000226683 750 ntBASIC14.39□□□□□ -0.11
IsxA1A546 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
IsxA1A546 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IsxA1A546 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.39□□□□□ -0.11
IsxA1A546 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.38□□□□□ -0.11
IsxA1A546 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IsxA1A546 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IsxA1A546 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.38□□□□□ -0.11
IsxA1A546 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
IsxA1A546 Gm7977-201ENSMUST00000193787 748 ntBASIC14.38□□□□□ -0.11
IsxA1A546 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IsxA1A546 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms