Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc112A0AUP1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc112A0AUP1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Gm14722-201ENSMUST00000118943 689 ntBASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc112A0AUP1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc112A0AUP1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Gm27742-201ENSMUST00000184667 60 ntBASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc112A0AUP1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc112A0AUP1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc112A0AUP1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc112A0AUP1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc112A0AUP1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms