Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm27867-201ENSMUST00000184778 125 ntBASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm15165-201ENSMUST00000118140 502 ntBASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav13n-4A0A0G2JG01 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav13n-4A0A0G2JG01 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav13n-4A0A0G2JG01 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms