Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm43799-201ENSMUST00000201845 579 ntBASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm44430-201ENSMUST00000203376 995 ntBASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm22697-201ENSMUST00000175194 63 ntBASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm11355-201ENSMUST00000121120 306 ntBASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13d-4A0A0G2JFX3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms