Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm13418-201ENSMUST00000119097 944 ntBASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm15173-201ENSMUST00000122049 433 ntBASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gm8655-201ENSMUST00000221159 852 ntBASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13n-1A0A0G2JEU8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm25990-201ENSMUST00000102440 86 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mir6404-201ENSMUST00000183699 94 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.2□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms