Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm27357-201ENSMUST00000183754 135 ntBASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm9172-201ENSMUST00000212092 954 ntBASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Grk6-207ENSMUST00000225925 2769 ntBASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms