Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm37179-201ENSMUST00000194862 823 ntBASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv3A0A0A6YYE2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv3A0A0A6YYE2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm27463-201ENSMUST00000183569 57 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm37856-201ENSMUST00000191634 999 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Trmt13-210ENSMUST00000198454 880 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gm10602-201ENSMUST00000098239 609 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv3A0A0A6YYE2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trbv3A0A0A6YYE2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms