Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv1-42A0A0A6YY38 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm15920-201ENSMUST00000118998 402 ntBASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv1-42A0A0A6YY38 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv1-42A0A0A6YY38 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm16198-201ENSMUST00000118766 670 ntBASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.2□□□□□ -0.14
Ighv1-42A0A0A6YY38 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms