Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rprl3-201ENSMUST00000157400 290 ntBASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav21-dv12A0A075B6C4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm25406-201ENSMUST00000157599 105 ntBASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Gm27742-201ENSMUST00000184667 60 ntBASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav21-dv12A0A075B6C4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav21-dv12A0A075B6C4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav21-dv12A0A075B6C4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav21-dv12A0A075B6C4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav21-dv12A0A075B6C4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav21-dv12A0A075B6C4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms