Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm10052-201ENSMUST00000168019 960 ntBASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm7729-201ENSMUST00000050143 801 ntBASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm13559-201ENSMUST00000120476 863 ntBASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm27389-201ENSMUST00000183622 195 ntBASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm18959-201ENSMUST00000208954 655 ntBASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms