Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Mir6404-201ENSMUST00000183699 94 ntBASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Odf3b-204ENSMUST00000227834 930 ntBASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gm7367-201ENSMUST00000057611 492 ntBASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-5A0A075B6B5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Gm27463-201ENSMUST00000183569 57 ntBASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-5A0A075B6B5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms