Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Trav6n-6A0A075B6B2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6n-6A0A075B6B2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.58□□□□□ -0.55
Trav6n-6A0A075B6B2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm12134-201ENSMUST00000122109 520 ntBASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav6n-6A0A075B6B2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm13186-201ENSMUST00000118031 316 ntBASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm9013-201ENSMUST00000132939 882 ntBASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6n-6A0A075B6B2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav6n-6A0A075B6B2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms