Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Gm13312-201ENSMUST00000119631 718 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 Gm25016-201ENSMUST00000158399 131 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.69□□□□□ -0.38
Trav18A0A075B656 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav18A0A075B656 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.68□□□□□ -0.38
Trav18A0A075B656 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.68□□□□□ -0.38
Trav18A0A075B656 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.68□□□□□ -0.38
Trav18A0A075B656 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav18A0A075B656 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.67□□□□□ -0.38
Trav18A0A075B656 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav18A0A075B656 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav18A0A075B656 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.67□□□□□ -0.38
Trav18A0A075B656 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav18A0A075B656 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms