Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm25255-201ENSMUST00000179579 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24755-201ENSMUST00000179691 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm26506-201ENSMUST00000179692 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm25086-201ENSMUST00000179931 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm23243-201ENSMUST00000180047 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24659-201ENSMUST00000180212 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm24169-201ENSMUST00000180244 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm23689-201ENSMUST00000180354 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm27359-201ENSMUST00000184153 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm27785-201ENSMUST00000184268 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm27466-201ENSMUST00000184396 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm27703-201ENSMUST00000184836 110 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8n-2A0A075B633 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8n-2A0A075B633 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm25287-201ENSMUST00000103846 110 ntBASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm22918-201ENSMUST00000103855 110 ntBASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm10499-201ENSMUST00000174094 934 ntBASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8n-2A0A075B633 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms