Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Gm7230-201ENSMUST00000173026 815 ntBASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Mir6404-201ENSMUST00000183699 94 ntBASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13d-1A0A075B606 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.35□□□□□ -0.59
Trav13d-1A0A075B606 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13d-1A0A075B606 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms