Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv4A0A075B5I2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gm4535-201ENSMUST00000182274 558 ntBASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gm10355-201ENSMUST00000097146 517 ntBASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv4A0A075B5I2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44357-201ENSMUST00000195897 142 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm19658-201ENSMUST00000196231 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44367-201ENSMUST00000196836 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44350-201ENSMUST00000197197 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44390-201ENSMUST00000197533 144 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44313-201ENSMUST00000198018 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44486-201ENSMUST00000198508 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44314-201ENSMUST00000199263 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44394-201ENSMUST00000199558 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44484-201ENSMUST00000199873 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44466-201ENSMUST00000200264 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm44359-201ENSMUST00000200671 138 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gm6296-201ENSMUST00000222599 943 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv4A0A075B5I2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Birc2-201ENSMUST00000054878 378 ntBASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv4A0A075B5I2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms