Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Skp2Q9Z0Z3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Gm6257-201ENSMUST00000163864 910 ntBASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Skp2Q9Z0Z3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Skp2Q9Z0Z3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Skp2Q9Z0Z3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms