Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Gm12008-201ENSMUST00000117791 755 ntBASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smarcb1Q9Z0H3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Gm17968-201ENSMUST00000194902 784 ntBASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Thap2-203ENSMUST00000218989 527 ntBASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smarcb1Q9Z0H3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smarcb1Q9Z0H3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcb1Q9Z0H3 Gm5648-201ENSMUST00000122244 1587 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Gm15427-201ENSMUST00000117288 531 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Gm26308-201ENSMUST00000157768 69 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Gm10499-201ENSMUST00000174094 934 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcb1Q9Z0H3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms