Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Gm6659-201ENSMUST00000174752 547 ntBASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ptpn4Q9WU22 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Gm10013-201ENSMUST00000106074 672 ntBASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ptpn4Q9WU22 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Gm12134-201ENSMUST00000122109 520 ntBASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Gm16061-201ENSMUST00000122167 857 ntBASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Efs-202ENSMUST00000227037 2540 ntBASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Ptpn4Q9WU22 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Gm13474-201ENSMUST00000122466 815 ntBASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Gm18032-201ENSMUST00000222541 538 ntBASIC15.27■□□□□ 0.04
Ptpn4Q9WU22 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms