Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atp6ap1Q9R1Q9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Mir8098-201ENSMUST00000184011 137 ntBASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atp6ap1Q9R1Q9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Grk6-207ENSMUST00000225925 2769 ntBASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atp6ap1Q9R1Q9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.13■□□□□ 0.01
Atp6ap1Q9R1Q9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms