Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nr2e3Q9QXZ7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nr2e3Q9QXZ7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Gm18489-201ENSMUST00000172565 551 ntBASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr2e3Q9QXZ7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm27628-201ENSMUST00000184911 107 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm9682-201ENSMUST00000197505 556 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm45167-201ENSMUST00000208007 322 ntBASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr2e3Q9QXZ7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr2e3Q9QXZ7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms