Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Gm17808-201ENSMUST00000200859 894 ntBASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chaf1aQ9QWF0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Gm11950-201ENSMUST00000121615 838 ntBASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chaf1aQ9QWF0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
Chaf1aQ9QWF0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Mir6404-201ENSMUST00000183699 94 ntBASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chaf1aQ9QWF0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.33■□□□□ 0.37
Chaf1aQ9QWF0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1aQ9QWF0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1aQ9QWF0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1aQ9QWF0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chaf1aQ9QWF0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Gm29518-201ENSMUST00000190858 372 ntBASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Chaf1aQ9QWF0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms