Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Crlf1Q9JM58 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.38□□□□□ -0.43
Crlf1Q9JM58 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Gm25144-201ENSMUST00000179561 110 ntBASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Gm25352-201ENSMUST00000179815 110 ntBASIC12.38□□□□□ -0.43
Crlf1Q9JM58 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Crlf1Q9JM58 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm11543-201ENSMUST00000120758 370 ntBASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm14719-201ENSMUST00000121891 340 ntBASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Crlf1Q9JM58 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Crlf1Q9JM58 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms