Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfx5Q9JL61 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Gm10499-201ENSMUST00000174094 934 ntBASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfx5Q9JL61 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Gm18206-201ENSMUST00000207027 926 ntBASIC16.31■□□□□ 0.2
Rfx5Q9JL61 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx5Q9JL61 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm14140-201ENSMUST00000119999 995 ntBASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm7787-201ENSMUST00000216858 688 ntBASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx5Q9JL61 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx5Q9JL61 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms