Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Gm14722-201ENSMUST00000118943 689 ntBASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Gm5587-201ENSMUST00000206270 674 ntBASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpf2Q9JJ80 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Gm13312-201ENSMUST00000119631 718 ntBASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpf2Q9JJ80 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rpf2Q9JJ80 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rpf2Q9JJ80 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm8825-201ENSMUST00000182565 998 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm4518-201ENSMUST00000182638 718 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpf2Q9JJ80 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpf2Q9JJ80 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms