Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Gm13241-201ENSMUST00000094493 780 ntBASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gm11643-201ENSMUST00000119578 864 ntBASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Gm6139-201ENSMUST00000079261 882 ntBASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco4Q9JIS3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Gm12821-201ENSMUST00000120022 600 ntBASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco4Q9JIS3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco4Q9JIS3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco4Q9JIS3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms