Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm8825-201ENSMUST00000182565 998 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm4518-201ENSMUST00000182638 718 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a3bpQ9EQG9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a3bpQ9EQG9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a3bpQ9EQG9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a3bpQ9EQG9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms