Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upf1Q9EPU0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm7399-201ENSMUST00000032395 858 ntBASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.41■□□□□ 0.38
Upf1Q9EPU0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Upf1Q9EPU0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Mir1894-201ENSMUST00000122802 81 ntBASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upf1Q9EPU0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Gm27572-201ENSMUST00000183702 255 ntBASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Gm27731-201ENSMUST00000185192 107 ntBASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Gm4857-201ENSMUST00000192718 785 ntBASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Upf1Q9EPU0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.38■□□□□ 0.37
Upf1Q9EPU0 Gm37714-201ENSMUST00000194742 342 ntBASIC17.38■□□□□ 0.37
Upf1Q9EPU0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms