Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Gm17807-201ENSMUST00000186869 298 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Ank2-226ENSMUST00000189368 339 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Gm7977-201ENSMUST00000193787 748 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Efs-202ENSMUST00000227037 2540 ntBASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne8Q9DC53 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Gm14859-201ENSMUST00000117752 357 ntBASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne8Q9DC53 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.15■□□□□ 0.18
Cpne8Q9DC53 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne8Q9DC53 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.14■□□□□ 0.18
Cpne8Q9DC53 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpne8Q9DC53 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpne8Q9DC53 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpne8Q9DC53 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Gm15372-201ENSMUST00000120729 834 ntBASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne8Q9DC53 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms