Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdc40Q9DC48 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdc40Q9DC48 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Gm27525-201ENSMUST00000184465 107 ntBASIC14.38□□□□□ -0.11
Cdc40Q9DC48 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdc40Q9DC48 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Gm8097-201ENSMUST00000117903 829 ntBASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Gm4459-201ENSMUST00000118750 468 ntBASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Gm1401-201ENSMUST00000122048 772 ntBASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Gm25406-201ENSMUST00000157599 105 ntBASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdc40Q9DC48 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm25990-201ENSMUST00000102440 86 ntBASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm12497-201ENSMUST00000138778 237 ntBASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdc40Q9DC48 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Gm12350-201ENSMUST00000121208 462 ntBASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdc40Q9DC48 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms