Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Gm37935-201ENSMUST00000192012 982 ntBASIC17.21■□□□□ 0.35
Tube1Q9D6T1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tube1Q9D6T1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.21■□□□□ 0.34
Tube1Q9D6T1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Tube1Q9D6T1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Tube1Q9D6T1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Gm7222-201ENSMUST00000117512 906 ntBASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.2■□□□□ 0.34
Tube1Q9D6T1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.19■□□□□ 0.34
Tube1Q9D6T1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tube1Q9D6T1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm13036-201ENSMUST00000117799 748 ntBASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm11779-201ENSMUST00000118541 368 ntBASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gm18622-201ENSMUST00000219361 595 ntBASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tube1Q9D6T1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tube1Q9D6T1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms