Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
5530400C23RikQ9D3I0 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.23■□□□□ 0.03
5530400C23RikQ9D3I0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
5530400C23RikQ9D3I0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
5530400C23RikQ9D3I0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
5530400C23RikQ9D3I0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Gm19164-201ENSMUST00000210667 640 ntBASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
5530400C23RikQ9D3I0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Gm8344-201ENSMUST00000119813 856 ntBASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
5530400C23RikQ9D3I0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
5530400C23RikQ9D3I0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
5530400C23RikQ9D3I0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44357-201ENSMUST00000195897 142 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm19658-201ENSMUST00000196231 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44367-201ENSMUST00000196836 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44350-201ENSMUST00000197197 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44390-201ENSMUST00000197533 144 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44313-201ENSMUST00000198018 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44486-201ENSMUST00000198508 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44314-201ENSMUST00000199263 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44394-201ENSMUST00000199558 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44484-201ENSMUST00000199873 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44466-201ENSMUST00000200264 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm44359-201ENSMUST00000200671 138 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.19■□□□□ 0.02
5530400C23RikQ9D3I0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms